This R Shiny app clusters samples based on their genotype data across a set of markers and creates MDS, tree, and tile plots.
Sample data files can be found at:
One sample file is tab-delimited and the other is comma-separated. In the file named 'sample-data.snps.txt', both 'N' and 'U' represent NA values. Therefore, enter the following into the field for NA strings: N,U